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First Human Case From New Bird Flu: How Many More Strains Are Out There?

Influenza covers its shell with two types of accessories: the H spike, blue, and the N spike, red. Here the flu particle is sliced open to show its genetic material.
Centers for Disease Control and Prevention, National Center for Immunization and Respiratory Diseases
Influenza covers its shell with two types of accessories: the H spike, blue, and the N spike, red. Here the flu particle is sliced open to show its genetic material.

On Christmas Day last year, a 68-year-old woman in southern China came down with the flu. A week later she was hospitalized.

The woman eventually recovered, but she spent three weeks in the hospital.

The culprit? H7N4, a new type of bird flu.

"This is the first case of human infection with avian influenza A (H7N4) in the world," the Hong Kong Centre for Health Protection said Wednesday in a statement.

The woman caught the virus from a live chicken, the agency said. And there's no signs she spread it to anyone else.

So there's no need to panic. Clearly, the virus rarely jumps from birds into people.

But the new case does add to a growing list of bird flu strains to keep an eye on.

There's the dangerous H7N9, which killed nearly 300 people in China in 2017. And the deadly H5N1, which regularly crops up around southern Asia and the Middle East every now and then. And here, in the U.S., we've been battling H3N2, which is notorious for sending people to the hospital.

Oh, let's not forget that pain in the neck H1N1, or the swine flu, which swept through the U.S. in 2009.

What in the heck do all these H's and N's mean? H is short for hemagglutinin. And N is short for neuraminidase. More about those in just a moment.

But first, we've got to cover the ABCs.

Human flu viruses come in three basic types: A, B and C. The second two — influenza B and influenza C — we don't hear too much about because they don't cause pandemics.

The big trouble-makers are the influenza A strains. And boy, are they deviants.

Among other things, influenza A viruses are fashionistas. They cover themselves in an array of accessories.

But instead of wearing Dolce and Gabbana, influenza prefers "H & N," aka hemagglutinin and neuraminidase.

Hemagglutinin and neuraminidase are little protein spikes on the flu's surface. Hemagglutinin helps the virus enter cells, while neuraminidase helps it leave cells.

Just like handbags and shoes, the spikes come in a variety of styles. There are 18 versions of hemagluttinin and 11 for neuremanidase.

Each bird flu picks out one style from the N rack and another from the H rack. The new bird flu in China, H7N9, covers itself in H7 and N9, while H1N1 is a bit more low-key and goes only for style No. 1 from each.

All told, there are 198 potential subtypes of influenza A: from H1N1 to H18N11.

Many of these viruses exist in wild birds around the world, so they are bird flus. But every now and then, one evolves the ability to infect other animals.

H1N1 is one of the more promiscuous. It can infect birds, people, pigs and horses. H2N2, on the other hand, only makes its way into people and birds.

But all influenza A strains are social climbers. They're always itching to try out new living quarters.

So they mutate. And they also do something even more insidious: They swap accessories.

Geneticists call it reassortment. And, historically, it signals trouble.

Say a bird gets infected with two viruses: H1N1 and H2N2. When the two viruses reproduce inside the bird's cells, H1N1 can grab accessories from H2N2.

This creates a new strain that looks like H2N2 but can now infect people (because it started off as just H1N1).

That's what happened in 1957 during the Asian flu pandemic, says computational biologist Richard Goldstein, from the National Institute for Medical Research in London.

Since H2N2 had never infected people before, our immune systems had never seen these accessories and thus, we had little defense against it. The new strain ended up killing roughly 70,000 Americans.

But the virus didn't stop there. "It then picked up H3 from birds in 1968 to cause the Hong Kong flu pandemic," Goldstein tells Shots. That killed another 30,000 Americans.

What about more recent epidemics?

"The 2009 flu was a real mess," he says. "The virus had some segments from H3N2 circulating in humans from the 1968 pandemic. It had genes coming in from birds, an H1 coming from pigs and an N1 coming in from a completely different virus," he says. "They all then mixed together in pigs."

Scientists are still trying to figure out H7N9.

So far, it looks like the virus got its H from ducks, its N from migratory birds and a splash of other genetic material from chickens, immunologists reported in 2013 in The Lancet.

But how this fashion bug found its way into people is still a mystery.


This article incorporates material about flu that was published by Shots in 2013.

Copyright 2020 NPR. To see more, visit https://www.npr.org.

Corrected: February 26, 2018 at 12:00 AM EST
A previous version of this story incorrectly stated the number of possible H and N combinations. There are 18 versions of hemagglutinin and 11 versions of neuraminidase, making a total of 198 subtypes of influenza A, not 144. A previous version of this story also incorrectly stated the function of neuraminidase. The virus uses neuraminidase while exiting the cell, not entering the cell.
Michaeleen Doucleff, PhD, is a correspondent for NPR's Science Desk. For nearly a decade, she has been reporting for the radio and the web for NPR's global health outlet, Goats and Soda. Doucleff focuses on disease outbreaks, cross-cultural parenting, and women and children's health.